We also need to reset the last doc to null, when we declare a function/method, as otherwise it will apply the tags in cases like:

/**
 * @deprecated some text 
 */
add_filter( 'foo', 'bar' );

/**
 * @deprecated other text
 */
function hello() {
	return apply_filters( 'my_filter', '' );
}

"my_filter" will suddenly have the @deprecated some text comment added, even though it's completely irrelevant

Just add $this->last_doc = null; before this line